microglia_analyzer.tiles package

Submodules

• microglia_analyzer.tiles.patch module
  • Patch2D
    • Patch2D.as_napari_rectangle()
• microglia_analyzer.tiles.plot module
  • plot_patches_layout()
• microglia_analyzer.tiles.recalibrate module
  • get_net2ori_factor()
  • get_ori2net_factor()
  • process_factor()
  • recalibrate_shape()
  • scaling
    • scaling.from_calibration
      • scaling.from_calibration.net2ori()
      • scaling.from_calibration.ori2net()
    • scaling.from_shape()
• microglia_analyzer.tiles.tiler module
  • ImageTiler2D
    • ImageTiler2D.get_grid_size()
    • ImageTiler2D.get_layout()
    • ImageTiler2D.image_to_tiles()
    • ImageTiler2D.tiles_to_image()
  • make_gradient_patch()
  • normalize()

Module contents