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Slot: considered_bead_centers_intensity_outlier

The centers of the beads detected but considered as being too intense and potentially represent a cluster of beads. Intensity robust z-score over requested threshold. Measurements on these bead not considered for the dataset analysis. One point will be provided per bead. One ROI per channel.

URI: microscopemetrics_schema:considered_bead_centers_intensity_outlier Alias: considered_bead_centers_intensity_outlier

Applicable Classes

Name Description Modifies Slot
PSFBeadsOutput no

Properties

  • Range: Roi

  • Multivalued: True

Identifier and Mapping Information

Schema Source

  • from schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema

Mappings

Mapping Type Mapped Value
self microscopemetrics_schema:considered_bead_centers_intensity_outlier
native microscopemetrics_schema:considered_bead_centers_intensity_outlier

LinkML Source

name: considered_bead_centers_intensity_outlier
description: The centers of the beads detected but considered as being too intense
  and potentially represent a cluster of beads. Intensity robust z-score over requested
  threshold. Measurements on these bead not considered for the dataset analysis. One
  point will be provided per bead. One ROI per channel.
from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema
rank: 1000
alias: considered_bead_centers_intensity_outlier
owner: PSFBeadsOutput
domain_of:
- PSFBeadsOutput
range: Roi
multivalued: true
inlined: true
inlined_as_list: true