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Class: Sample

A sample is a standard physical object that is imaged by a microscope

  • NOTE: this is an abstract class and should not be instantiated directly

URI: microscopemetrics_schema:Sample

classDiagram class Sample click Sample href "../Sample" NamedObject <|-- Sample click NamedObject href "../NamedObject" Sample <|-- HomogeneousField click HomogeneousField href "../HomogeneousField" Sample <|-- PSFBeads click PSFBeads href "../PSFBeads" Sample <|-- LightSourcePower click LightSourcePower href "../LightSourcePower" Sample : description Sample : manufacturer Sample : name Sample : preparation_protocol Sample --> "1" Protocol : preparation_protocol click Protocol href "../Protocol"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
preparation_protocol 1
Protocol		 The protocol used to prepare a sample direct
manufacturer 0..1
String		 A manufacturer direct
name 0..1
String		 The human readable name of an entity NamedObject
description 0..1
String		 A human readable description of an entity NamedObject

Usages

used by used in type used
HasSampleMixin sample range Sample

Identifier and Mapping Information

Schema Source

  • from schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema

Mappings

Mapping Type Mapped Value
self microscopemetrics_schema:Sample
native microscopemetrics_schema:Sample

LinkML Source

Direct

name: Sample
description: A sample is a standard physical object that is imaged by a microscope
from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema
is_a: NamedObject
abstract: true
slots:
- preparation_protocol
- manufacturer

Induced

name: Sample
description: A sample is a standard physical object that is imaged by a microscope
from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema
is_a: NamedObject
abstract: true
attributes:
  preparation_protocol:
    name: preparation_protocol
    description: The protocol used to prepare a sample
    from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema
    rank: 1000
    alias: preparation_protocol
    owner: Sample
    domain_of:
    - Sample
    range: Protocol
    required: true
    multivalued: false
    inlined: false
  manufacturer:
    name: manufacturer
    description: A manufacturer
    from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema
    rank: 1000
    alias: manufacturer
    owner: Sample
    domain_of:
    - Microscope
    - Sample
    - PowerMeter
    range: string
    required: false
  name:
    name: name
    description: The human readable name of an entity
    from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema/core
    rank: 1000
    alias: name
    owner: Sample
    domain_of:
    - NamedObject
    range: string
    required: false
    multivalued: false
  description:
    name: description
    description: A human readable description of an entity
    from_schema: https://MontpellierRessourcesImagerie.github.io/microscopemetrics-schema/core
    rank: 1000
    alias: description
    owner: Sample
    domain_of:
    - NamedObject
    range: string
    required: false
    multivalued: false