Class: Roi

A ROI. Collection of shapes and an image to which they are applied

classDiagram class Roi Roi : description Roi : image Roi --|> Image : image Roi : label Roi : shapes Roi --|> Shape : shapes

Slots

Name	Cardinality and Range	Description	Inheritance
label	0..1 String	The label of the ROI	direct
description	0..1 String	A description of the ROI	direct
image	0..* Image	The image to which the ROI is applied	direct
shapes	0..* Shape		direct

Usages

used by	used in	type	used
ArgolightBOutput	spots_centroids	range	Roi
ArgolightEOutput	peaks_rois	range	Roi
FieldIlluminationOutput	profile_rois	range	Roi
FieldIlluminationOutput	corner_rois	range	Roi
FieldIlluminationOutput	center_of_illumination	range	Roi

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema

Mappings

Mapping Type	Mapped Value
self	microscopemetrics_schema:Roi
native	microscopemetrics_schema:Roi

LinkML Source

Direct

name: Roi
description: A ROI. Collection of shapes and an image to which they are applied
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
attributes:
  label:
    name: label
    description: The label of the ROI
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    range: string
    required: false
  description:
    name: description
    description: A description of the ROI
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    multivalued: false
    range: string
    required: false
  image:
    name: image
    description: The image to which the ROI is applied
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    range: Image
    required: false
    inlined: false
  shapes:
    name: shapes
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    range: Shape

Induced

name: Roi
description: A ROI. Collection of shapes and an image to which they are applied
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
attributes:
  label:
    name: label
    description: The label of the ROI
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: label
    owner: Roi
    domain_of:
    - Roi
    - Shape
    range: string
    required: false
  description:
    name: description
    description: A description of the ROI
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    multivalued: false
    alias: description
    owner: Roi
    domain_of:
    - NamedObject
    - Roi
    - Tag
    range: string
    required: false
  image:
    name: image
    description: The image to which the ROI is applied
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: image
    owner: Roi
    domain_of:
    - Roi
    range: Image
    required: false
    inlined: false
  shapes:
    name: shapes
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: shapes
    owner: Roi
    domain_of:
    - Roi
    range: Shape