Class: MetricsDataset

A base object on which microscope-metrics runs the analysis

URI: microscopemetrics_schema:MetricsDataset

classDiagram class MetricsDataset NamedObject <|-- MetricsDataset MetricsDataset <|-- ArgolightBDataset MetricsDataset <|-- ArgolightEDataset MetricsDataset <|-- FieldIlluminationDataset MetricsDataset : acquisition_date MetricsDataset : comment MetricsDataset --|> Comment : comment MetricsDataset : description MetricsDataset : experimenter MetricsDataset --|> Experimenter : experimenter MetricsDataset : name MetricsDataset : processed MetricsDataset : processing_date MetricsDataset : processing_log MetricsDataset : sample MetricsDataset --|> Sample : sample

Inheritance

NamedObject
- MetricsDataset

Slots

Name	Cardinality and Range	Description	Inheritance
sample	0..1 Sample	The sample that was imaged	direct
experimenter	0..* Experimenter	The experimenter that performed the imaging experiment	direct
acquisition_date	0..1 Date	The date of the acquisition	direct
processed	1..1 Boolean	Has the dataset been processed by microscope-metrics	direct
processing_date	0..1 Date	The date of the processing by microscope-metrics	direct
processing_log	0..1 String	The log of the processing by microscope-metrics	direct
comment	0..* Comment	A human readable comment about the dataset	direct
name	0..1 String	The name of an entity	NamedObject
description	0..1 String	A description of an entity	NamedObject

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema

Mappings

Mapping Type	Mapped Value
self	microscopemetrics_schema:MetricsDataset
native	microscopemetrics_schema:MetricsDataset

LinkML Source

Direct

name: MetricsDataset
description: A base object on which microscope-metrics runs the analysis
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: NamedObject
attributes:
  sample:
    name: sample
    description: The sample that was imaged
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    range: Sample
    inlined: false
  experimenter:
    name: experimenter
    description: The experimenter that performed the imaging experiment
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    range: Experimenter
  acquisition_date:
    name: acquisition_date
    description: The date of the acquisition
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    range: date
  processed:
    name: processed
    description: Has the dataset been processed by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    ifabsent: 'False'
    range: boolean
    required: true
  processing_date:
    name: processing_date
    description: The date of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    range: date
  processing_log:
    name: processing_log
    description: The log of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    range: string
  comment:
    name: comment
    description: A human readable comment about the dataset
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    range: Comment
    required: false
tree_root: true

Induced

name: MetricsDataset
description: A base object on which microscope-metrics runs the analysis
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: NamedObject
attributes:
  sample:
    name: sample
    description: The sample that was imaged
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: sample
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: Sample
    inlined: false
  experimenter:
    name: experimenter
    description: The experimenter that performed the imaging experiment
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: experimenter
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: Experimenter
  acquisition_date:
    name: acquisition_date
    description: The date of the acquisition
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: acquisition_date
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: date
  processed:
    name: processed
    description: Has the dataset been processed by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    ifabsent: 'False'
    alias: processed
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: boolean
    required: true
  processing_date:
    name: processing_date
    description: The date of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: processing_date
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: date
  processing_log:
    name: processing_log
    description: The log of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: processing_log
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: string
  comment:
    name: comment
    description: A human readable comment about the dataset
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: comment
    owner: MetricsDataset
    domain_of:
    - MetricsDataset
    range: Comment
    required: false
  name:
    name: name
    description: The name of an entity
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
    rank: 1000
    multivalued: false
    alias: name
    owner: MetricsDataset
    domain_of:
    - NamedObject
    - Experimenter
    - Column
    range: string
    required: false
  description:
    name: description
    description: A description of an entity
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
    rank: 1000
    multivalued: false
    alias: description
    owner: MetricsDataset
    domain_of:
    - NamedObject
    - Roi
    - Tag
    range: string
tree_root: true