Class: Image5D
A 5D image in TZYXC order
URI: microscopemetrics_schema:Image5D
classDiagram
class Image5D
ImageInline <|-- Image5D
Image5D : c
Image5D --|> ChannelSeries : c
Image5D : data
Image5D : description
Image5D : image_url
Image5D : name
Image5D : source_image_url
Image5D : t
Image5D --|> TimeSeries : t
Image5D : x
Image5D --|> PixelSeries : x
Image5D : y
Image5D --|> PixelSeries : y
Image5D : z
Image5D --|> PixelSeries : z
Inheritance
- NamedObject
- MetricsObject
- Image
- ImageInline
- Image5D
- ImageInline
- Image
- MetricsObject
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
t | 1..1 TimeSeries |
direct | |
z | 1..1 PixelSeries |
direct | |
y | 1..1 PixelSeries |
direct | |
x | 1..1 PixelSeries |
direct | |
c | 1..1 ChannelSeries |
direct | |
data | 1..* Float |
direct | |
image_url | 1..1 String |
An URL linking to the image | Image |
source_image_url | 0..* String |
A list of URLs linking to the images that were used as a source | Image |
name | 0..1 String |
The name of an entity | NamedObject |
description | 0..1 String |
A description of an entity | NamedObject |
Usages
used by | used in | type | used |
---|---|---|---|
FieldIlluminationOutput | intensity_map | range | Image5D |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
Mappings
Mapping Type | Mapped Value |
---|---|
self | microscopemetrics_schema:Image5D |
native | microscopemetrics_schema:Image5D |
LinkML Source
Direct
name: Image5D
implements:
- linkml:FiveDimensionalArray
- linkml:RowOrderedArray
description: A 5D image in TZYXC order
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: ImageInline
attributes:
t:
name: t
implements:
- linkml:axis0
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
rank: 1000
range: TimeSeries
required: true
z:
name: z
implements:
- linkml:axis1
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
rank: 1000
range: PixelSeries
required: true
y:
name: y
implements:
- linkml:axis2
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
range: PixelSeries
required: true
x:
name: x
implements:
- linkml:axis3
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
range: PixelSeries
required: true
c:
name: c
implements:
- linkml:axis4
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
rank: 1000
range: ChannelSeries
required: true
data:
name: data
implements:
- linkml:elements
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
multivalued: true
range: float
required: true
Induced
name: Image5D
implements:
- linkml:FiveDimensionalArray
- linkml:RowOrderedArray
description: A 5D image in TZYXC order
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: ImageInline
attributes:
t:
name: t
implements:
- linkml:axis0
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
rank: 1000
alias: t
owner: Image5D
domain_of:
- Image5D
- Shape
range: TimeSeries
required: true
z:
name: z
implements:
- linkml:axis1
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
rank: 1000
alias: z
owner: Image5D
domain_of:
- Image5D
- Shape
range: PixelSeries
required: true
y:
name: y
implements:
- linkml:axis2
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
alias: y
owner: Image5D
domain_of:
- ImageMask
- Image2D
- Image5D
- Point
- Rectangle
- Ellipse
- Vertex
- Mask
range: PixelSeries
required: true
x:
name: x
implements:
- linkml:axis3
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
alias: x
owner: Image5D
domain_of:
- ImageMask
- Image2D
- Image5D
- Point
- Rectangle
- Ellipse
- Vertex
- Mask
range: PixelSeries
required: true
c:
name: c
implements:
- linkml:axis4
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
rank: 1000
alias: c
owner: Image5D
domain_of:
- Image5D
- Shape
range: ChannelSeries
required: true
data:
name: data
implements:
- linkml:elements
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
multivalued: true
alias: data
owner: Image5D
domain_of:
- ImageAsNumpy
- ImageMask
- Image2D
- Image5D
range: float
required: true
image_url:
name: image_url
description: An URL linking to the image
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
rank: 1000
multivalued: false
identifier: true
alias: image_url
owner: Image5D
domain_of:
- Image
range: string
required: true
source_image_url:
name: source_image_url
description: A list of URLs linking to the images that were used as a source
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
rank: 1000
multivalued: true
alias: source_image_url
owner: Image5D
domain_of:
- Image
range: string
required: false
name:
name: name
description: The name of an entity
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
rank: 1000
multivalued: false
alias: name
owner: Image5D
domain_of:
- NamedObject
- Experimenter
- Column
range: string
required: false
description:
name: description
description: A description of an entity
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
rank: 1000
multivalued: false
alias: description
owner: Image5D
domain_of:
- NamedObject
- Roi
- Tag
range: string