Class: FieldIlluminationDataset

A field illumination dataset

URI: microscopemetrics_schema:FieldIlluminationDataset

classDiagram class FieldIlluminationDataset MetricsDataset <|-- FieldIlluminationDataset FieldIlluminationDataset : acquisition_date FieldIlluminationDataset : comment FieldIlluminationDataset --|> Comment : comment FieldIlluminationDataset : description FieldIlluminationDataset : experimenter FieldIlluminationDataset --|> Experimenter : experimenter FieldIlluminationDataset : input FieldIlluminationDataset --|> FieldIlluminationInput : input FieldIlluminationDataset : name FieldIlluminationDataset : output FieldIlluminationDataset --|> FieldIlluminationOutput : output FieldIlluminationDataset : processed FieldIlluminationDataset : processing_date FieldIlluminationDataset : processing_log FieldIlluminationDataset : sample FieldIlluminationDataset --|> Sample : sample

Inheritance

NamedObject
- MetricsDataset
  - FieldIlluminationDataset

Slots

Name	Cardinality and Range	Description	Inheritance
input	1..1 FieldIlluminationInput		direct
output	0..1 FieldIlluminationOutput		direct
sample	0..1 Sample	The sample that was imaged	MetricsDataset
experimenter	0..* Experimenter	The experimenter that performed the imaging experiment	MetricsDataset
acquisition_date	0..1 Date	The date of the acquisition	MetricsDataset
processed	1..1 Boolean	Has the dataset been processed by microscope-metrics	MetricsDataset
processing_date	0..1 Date	The date of the processing by microscope-metrics	MetricsDataset
processing_log	0..1 String	The log of the processing by microscope-metrics	MetricsDataset
comment	0..* Comment	A human readable comment about the dataset	MetricsDataset
name	0..1 String	The name of an entity	NamedObject
description	0..1 String	A description of an entity	NamedObject

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema

Mappings

Mapping Type	Mapped Value
self	microscopemetrics_schema:FieldIlluminationDataset
native	microscopemetrics_schema:FieldIlluminationDataset

LinkML Source

Direct

name: FieldIlluminationDataset
description: A field illumination dataset
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: MetricsDataset
attributes:
  input:
    name: input
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/field_illumination_schema
    multivalued: false
    range: FieldIlluminationInput
    required: true
  output:
    name: output
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/field_illumination_schema
    multivalued: false
    range: FieldIlluminationOutput
    required: false
rules:
- preconditions:
    slot_conditions:
      processed:
        name: processed
        equals_number: 1
  postconditions:
    slot_conditions:
      output:
        name: output
        required: true

Induced

name: FieldIlluminationDataset
description: A field illumination dataset
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: MetricsDataset
attributes:
  input:
    name: input
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/field_illumination_schema
    multivalued: false
    alias: input
    owner: FieldIlluminationDataset
    domain_of:
    - ArgolightBDataset
    - ArgolightEDataset
    - FieldIlluminationDataset
    range: FieldIlluminationInput
    required: true
  output:
    name: output
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/field_illumination_schema
    multivalued: false
    alias: output
    owner: FieldIlluminationDataset
    domain_of:
    - ArgolightBDataset
    - ArgolightEDataset
    - FieldIlluminationDataset
    range: FieldIlluminationOutput
    required: false
  sample:
    name: sample
    description: The sample that was imaged
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: sample
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: Sample
    inlined: false
  experimenter:
    name: experimenter
    description: The experimenter that performed the imaging experiment
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: experimenter
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: Experimenter
  acquisition_date:
    name: acquisition_date
    description: The date of the acquisition
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: acquisition_date
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: date
  processed:
    name: processed
    description: Has the dataset been processed by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    ifabsent: 'False'
    alias: processed
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: boolean
    required: true
  processing_date:
    name: processing_date
    description: The date of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: processing_date
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: date
  processing_log:
    name: processing_log
    description: The log of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: processing_log
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: string
  comment:
    name: comment
    description: A human readable comment about the dataset
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: comment
    owner: FieldIlluminationDataset
    domain_of:
    - MetricsDataset
    range: Comment
    required: false
  name:
    name: name
    description: The name of an entity
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
    rank: 1000
    multivalued: false
    alias: name
    owner: FieldIlluminationDataset
    domain_of:
    - NamedObject
    - Experimenter
    - Column
    range: string
    required: false
  description:
    name: description
    description: A description of an entity
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
    rank: 1000
    multivalued: false
    alias: description
    owner: FieldIlluminationDataset
    domain_of:
    - NamedObject
    - Roi
    - Tag
    range: string
rules:
- preconditions:
    slot_conditions:
      processed:
        name: processed
        equals_number: 1
  postconditions:
    slot_conditions:
      output:
        name: output
        required: true