Class: ArgolightEDataset

An Argolight sample pattern E dataset.

It contains resolution data on the axis indicated:

- axis 1 = Y resolution = lines along X axis

- axis 2 = X resolution = lines along Y axis

URI: microscopemetrics_schema:ArgolightEDataset

classDiagram class ArgolightEDataset MetricsDataset <|-- ArgolightEDataset ArgolightEDataset : acquisition_date ArgolightEDataset : comment ArgolightEDataset --|> Comment : comment ArgolightEDataset : description ArgolightEDataset : experimenter ArgolightEDataset --|> Experimenter : experimenter ArgolightEDataset : input ArgolightEDataset --|> ArgolightEInput : input ArgolightEDataset : name ArgolightEDataset : output ArgolightEDataset --|> ArgolightEOutput : output ArgolightEDataset : processed ArgolightEDataset : processing_date ArgolightEDataset : processing_log ArgolightEDataset : sample ArgolightEDataset --|> Sample : sample

Inheritance

NamedObject
- MetricsDataset
  - ArgolightEDataset

Slots

Name	Cardinality and Range	Description	Inheritance
input	1..1 ArgolightEInput	An input element for the analysis	direct
output	0..1 ArgolightEOutput	An output element from the analysis	direct
sample	0..1 Sample	The sample that was imaged	MetricsDataset
experimenter	0..* Experimenter	The experimenter that performed the imaging experiment	MetricsDataset
acquisition_date	0..1 Date	The date of the acquisition	MetricsDataset
processed	1..1 Boolean	Has the dataset been processed by microscope-metrics	MetricsDataset
processing_date	0..1 Date	The date of the processing by microscope-metrics	MetricsDataset
processing_log	0..1 String	The log of the processing by microscope-metrics	MetricsDataset
comment	0..* Comment	A human readable comment about the dataset	MetricsDataset
name	0..1 String	The name of an entity	NamedObject
description	0..1 String	A description of an entity	NamedObject

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema

Mappings

Mapping Type	Mapped Value
self	microscopemetrics_schema:ArgolightEDataset
native	microscopemetrics_schema:ArgolightEDataset

LinkML Source

Direct

name: ArgolightEDataset
description: 'An Argolight sample pattern E dataset.

  It contains resolution data on the axis indicated:

  - axis 1 = Y resolution = lines along X axis

  - axis 2 = X resolution = lines along Y axis'
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: MetricsDataset
attributes:
  input:
    name: input
    description: An input element for the analysis
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/argolight_schema
    multivalued: false
    range: ArgolightEInput
    required: true
  output:
    name: output
    description: An output element from the analysis
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/argolight_schema
    multivalued: false
    range: ArgolightEOutput
    required: false
rules:
- preconditions:
    slot_conditions:
      processed:
        name: processed
        equals_number: 1
  postconditions:
    slot_conditions:
      output:
        name: output
        required: true

Induced

name: ArgolightEDataset
description: 'An Argolight sample pattern E dataset.

  It contains resolution data on the axis indicated:

  - axis 1 = Y resolution = lines along X axis

  - axis 2 = X resolution = lines along Y axis'
from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
is_a: MetricsDataset
attributes:
  input:
    name: input
    description: An input element for the analysis
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/argolight_schema
    multivalued: false
    alias: input
    owner: ArgolightEDataset
    domain_of:
    - ArgolightBDataset
    - ArgolightEDataset
    - FieldIlluminationDataset
    range: ArgolightEInput
    required: true
  output:
    name: output
    description: An output element from the analysis
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/samples/argolight_schema
    multivalued: false
    alias: output
    owner: ArgolightEDataset
    domain_of:
    - ArgolightBDataset
    - ArgolightEDataset
    - FieldIlluminationDataset
    range: ArgolightEOutput
    required: false
  sample:
    name: sample
    description: The sample that was imaged
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: sample
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: Sample
    inlined: false
  experimenter:
    name: experimenter
    description: The experimenter that performed the imaging experiment
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: experimenter
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: Experimenter
  acquisition_date:
    name: acquisition_date
    description: The date of the acquisition
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: acquisition_date
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: date
  processed:
    name: processed
    description: Has the dataset been processed by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    ifabsent: 'False'
    alias: processed
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: boolean
    required: true
  processing_date:
    name: processing_date
    description: The date of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: processing_date
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: date
  processing_log:
    name: processing_log
    description: The log of the processing by microscope-metrics
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: false
    alias: processing_log
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: string
  comment:
    name: comment
    description: A human readable comment about the dataset
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema/core_schema
    rank: 1000
    multivalued: true
    alias: comment
    owner: ArgolightEDataset
    domain_of:
    - MetricsDataset
    range: Comment
    required: false
  name:
    name: name
    description: The name of an entity
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
    rank: 1000
    multivalued: false
    alias: name
    owner: ArgolightEDataset
    domain_of:
    - NamedObject
    - Experimenter
    - Column
    range: string
    required: false
  description:
    name: description
    description: A description of an entity
    from_schema: https://w3id.org/MontpellierRessourcesImagerie/microscopemetrics-schema
    rank: 1000
    multivalued: false
    alias: description
    owner: ArgolightEDataset
    domain_of:
    - NamedObject
    - Roi
    - Tag
    range: string
rules:
- preconditions:
    slot_conditions:
      processed:
        name: processed
        equals_number: 1
  postconditions:
    slot_conditions:
      output:
        name: output
        required: true