Index

A

add_calibration_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] add_frames_to_video() (entry_exit_mouse_box.mask_from_video.MaskFromBackground method), [1] add_media_control_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] add_row() (entry_exit_mouse_box.MouseInOutWidget method), [1] add_source() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1]

add_tracking_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] add_video_control_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] apply_calibration() (entry_exit_mouse_box.MouseInOutWidget method), [1] apply_lut() (in module entry_exit_mouse_box.utils), [1]

B

background_ready (entry_exit_mouse_box.MouseInOutWidget attribute), [1] bg_ready (entry_exit_mouse_box.QtWorkerVMP attribute), [1] (entry_exit_mouse_box.video_mean_processor.QtWorkerVMP attribute), [1]

build_labels_from_polygon() (entry_exit_mouse_box.MouseInOutWidget method), [1]

C

calculate_maximal_length() (in module entry_exit_mouse_box.measures), [1] calibrate_results() (entry_exit_mouse_box.MouseInOutWidget method), [1] cast_to_pixels() (in module entry_exit_mouse_box.utils), [1]

clear_state() (entry_exit_mouse_box.MouseInOutWidget method), [1] convert_to_avi() (entry_exit_mouse_box.convert_format.QtWorkerC2A method) create_temp_dir() (entry_exit_mouse_box.MouseInOutWidget method), [1]

D

dump_table() (entry_exit_mouse_box.MouseInOutWidget method), [1]

dump_temp_files() (entry_exit_mouse_box.MouseInOutWidget method), [1] duration_to_frames() (entry_exit_mouse_box.MouseInOutWidget method), [1]

E

entry_exit_mouse_box module, [1] entry_exit_mouse_box.convert_format module entry_exit_mouse_box.mask_from_video module, [1] entry_exit_mouse_box.measures module, [1] entry_exit_mouse_box.media_manager module, [1] entry_exit_mouse_box.results_table module, [1]

entry_exit_mouse_box.utils module, [1] entry_exit_mouse_box.video_mean_processor module, [1] experiment_duration_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] export_data() (entry_exit_mouse_box.results_table.ResultsTable method), [1] (entry_exit_mouse_box.ResultsTable method), [1] export_results() (entry_exit_mouse_box.MouseInOutWidget method), [1] export_table_to_csv() (entry_exit_mouse_box.results_table.ResultsTable method), [1] (entry_exit_mouse_box.ResultsTable method), [1] extract_classes() (entry_exit_mouse_box.MouseInOutWidget method), [1] extract_measures() (entry_exit_mouse_box.MouseInOutWidget method), [1]

F

file_ready (entry_exit_mouse_box.convert_format.QtWorkerC2A attribute)

fix_visibility() (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] FrameWiseResultsTable (class in entry_exit_mouse_box.results_table), [1]

G

get_current_frame_number() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_fps() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_height() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_n_frames() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_n_sources() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1]

get_source_by_index() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_source_by_name() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_video_properties() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] get_width() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1]

H

hide_paths() (entry_exit_mouse_box.MouseInOutWidget method), [1]

I

init_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] (entry_exit_mouse_box.results_table.ResultsTable method), [1] (entry_exit_mouse_box.ResultsTable method), [1]

J

jump_backward() (entry_exit_mouse_box.MouseInOutWidget method), [1]

jump_forward() (entry_exit_mouse_box.MouseInOutWidget method), [1]

L

launch_convert() (entry_exit_mouse_box.MouseInOutWidget method), [1]

launch_mask_processing() (entry_exit_mouse_box.MouseInOutWidget method), [1] launch_tracking() (entry_exit_mouse_box.MouseInOutWidget method), [1]

M

main_sessions() (in module entry_exit_mouse_box.results_table), [1] make_start_frame() (entry_exit_mouse_box.MouseInOutWidget method), [1] mask_ready (entry_exit_mouse_box.mask_from_video.QtWorkerMFV attribute), [1] (entry_exit_mouse_box.QtWorkerMFV attribute), [1] MaskFromBackground (class in entry_exit_mouse_box.mask_from_video), [1] measures_ready (entry_exit_mouse_box.measures.QtWorkerMVP attribute), [1] (entry_exit_mouse_box.MouseInOutWidget attribute), [1] (entry_exit_mouse_box.QtWorkerMVP attribute), [1] MediaManager (class in entry_exit_mouse_box), [1] (class in entry_exit_mouse_box.media_manager), [1] merge_close_points() (in module entry_exit_mouse_box.utils), [1]

MiceVisibilityProcessor (class in entry_exit_mouse_box.measures), [1] module entry_exit_mouse_box, [1] entry_exit_mouse_box.convert_format entry_exit_mouse_box.mask_from_video, [1] entry_exit_mouse_box.measures, [1] entry_exit_mouse_box.media_manager, [1] entry_exit_mouse_box.results_table, [1] entry_exit_mouse_box.utils, [1] entry_exit_mouse_box.video_mean_processor, [1] MouseInOutWidget (class in entry_exit_mouse_box), [1]

N

napari_get_reader() (in module entry_exit_mouse_box), [1]

O

on_slider_change() (entry_exit_mouse_box.MouseInOutWidget method), [1] on_spinbox_change() (entry_exit_mouse_box.MouseInOutWidget method), [1]

on_table_item_changed() (entry_exit_mouse_box.MouseInOutWidget method), [1] on_threshold_update() (entry_exit_mouse_box.MouseInOutWidget method), [1]

P

process_frames() (entry_exit_mouse_box.mask_from_video.MaskFromBackground method), [1] (entry_exit_mouse_box.video_mean_processor.VideoMeanProcessor method), [1] process_n_in_out() (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1]

process_sessions() (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] process_visibility_pos() (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] properties_match() (in module entry_exit_mouse_box.media_manager), [1]

Q

QtWorkerC2A (class in entry_exit_mouse_box.convert_format) QtWorkerMFV (class in entry_exit_mouse_box), [1] (class in entry_exit_mouse_box.mask_from_video), [1]

QtWorkerMVP (class in entry_exit_mouse_box), [1] (class in entry_exit_mouse_box.measures), [1] QtWorkerVMP (class in entry_exit_mouse_box), [1] (class in entry_exit_mouse_box.video_mean_processor), [1]

R

read_frames() (entry_exit_mouse_box.mask_from_video.MaskFromBackground method), [1] (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] (entry_exit_mouse_box.video_mean_processor.VideoMeanProcessor method), [1] read_names() (in module entry_exit_mouse_box.results_table), [1] release() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] release_resources() (entry_exit_mouse_box.mask_from_video.MaskFromBackground method), [1] (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] (entry_exit_mouse_box.video_mean_processor.VideoMeanProcessor method), [1] release_source() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1]

remove_row() (entry_exit_mouse_box.MouseInOutWidget method), [1] ResultsTable (class in entry_exit_mouse_box), [1] (class in entry_exit_mouse_box.results_table), [1] run() (entry_exit_mouse_box.convert_format.QtWorkerC2A method) (entry_exit_mouse_box.mask_from_video.QtWorkerMFV method), [1] (entry_exit_mouse_box.measures.QtWorkerMVP method), [1] (entry_exit_mouse_box.QtWorkerMFV method), [1] (entry_exit_mouse_box.QtWorkerMVP method), [1] (entry_exit_mouse_box.QtWorkerVMP method), [1] (entry_exit_mouse_box.video_mean_processor.QtWorkerVMP method), [1]

S

select_color() (entry_exit_mouse_box.MouseInOutWidget method), [1] select_file() (entry_exit_mouse_box.MouseInOutWidget method), [1] SessionsResultsTable (class in entry_exit_mouse_box.results_table), [1] set_active_ui() (entry_exit_mouse_box.MouseInOutWidget method), [1] set_calibration() (entry_exit_mouse_box.MouseInOutWidget method), [1] set_data() (entry_exit_mouse_box.results_table.FrameWiseResultsTable method), [1] (entry_exit_mouse_box.results_table.ResultsTable method), [1] (entry_exit_mouse_box.results_table.SessionsResultsTable method), [1] (entry_exit_mouse_box.ResultsTable method), [1] set_exp_name() (entry_exit_mouse_box.results_table.ResultsTable method), [1] (entry_exit_mouse_box.ResultsTable method), [1] set_frame() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] (entry_exit_mouse_box.MouseInOutWidget method), [1]

set_logger() (entry_exit_mouse_box.media_manager.MediaManager method), [1] (entry_exit_mouse_box.MediaManager method), [1] set_media() (entry_exit_mouse_box.MouseInOutWidget method), [1] set_min_area() (entry_exit_mouse_box.MouseInOutWidget method), [1] setup_logger() (in module entry_exit_mouse_box), [1] (in module entry_exit_mouse_box.utils), [1] smooth_centroids() (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] smooth_path_2d() (in module entry_exit_mouse_box.utils), [1] start_extract_background() (entry_exit_mouse_box.MouseInOutWidget method), [1] start_processing() (entry_exit_mouse_box.mask_from_video.MaskFromBackground method), [1] (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] (entry_exit_mouse_box.video_mean_processor.VideoMeanProcessor method), [1] switch_log_file() (entry_exit_mouse_box.MouseInOutWidget method), [1]

T

terminate_extract_background() (entry_exit_mouse_box.MouseInOutWidget method), [1] terminate_mask_processing() (entry_exit_mouse_box.MouseInOutWidget method), [1]

terminate_measures() (entry_exit_mouse_box.MouseInOutWidget method), [1] tracking_ready (entry_exit_mouse_box.MouseInOutWidget attribute), [1]

U

update_boxes() (entry_exit_mouse_box.MouseInOutWidget method), [1] update_calibration() (entry_exit_mouse_box.MouseInOutWidget method), [1] update_centroids() (entry_exit_mouse_box.MouseInOutWidget method), [1]

update_face_color() (entry_exit_mouse_box.MouseInOutWidget method), [1] update_mice_path() (entry_exit_mouse_box.MouseInOutWidget method), [1] update_playback_info() (entry_exit_mouse_box.MouseInOutWidget method), [1]

V

VideoMeanProcessor (class in entry_exit_mouse_box.video_mean_processor), [1]

W

worker() (entry_exit_mouse_box.mask_from_video.MaskFromBackground method), [1] (entry_exit_mouse_box.measures.MiceVisibilityProcessor method), [1] (entry_exit_mouse_box.video_mean_processor.VideoMeanProcessor method), [1]