bacteria_density.measure module

bacteria_density.measure.cumulative_distance(med_path, calibration)

bacteria_density.measure.get_execution_order()

bacteria_density.measure.get_functions()

bacteria_density.measure.get_metrics_by_order(target_when, to_process=None)

bacteria_density.measure.integrated_intensity(image_data, mask, calibration, n_bins, affectations, med_path, bins_indices, binning_dist)

bacteria_density.measure.integrated_volume(image_data, mask, calibration, n_bins, affectations, med_path, bins_indices, binning_dist)

bacteria_density.measure.local_density(ch_name, results_table)

bacteria_density.measure.local_width(image_data, mask, calibration, n_bins, affectations, med_path, bins_indices, binning_dist)